GCP for Bioinformatics - Build What's Next

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GCP for Bioinformatics

Join Cloud GDE and developer Lynn Langit in this fast-paced session to get resources you can use to learn how to use the Google Cloud Platform for bioinformatics.

Lynn has created an open source course (on GitHub) to introduce researchers to using GCP to scale their analysis jobs. In this short talk, she’ll guide you through her course materials, so that you can get started learning using examples from genomics.

She talks is divided into four parts:

  • What is needed?
  • Why do we need to have patterns?
  • How can you use pattern information,
  • How can you learn more.
Whitepaper

How Real IT Leaders Create a Machine Learning Strategy

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7:30 Minutes

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Sure, machine learning is becoming a business imperative, but how does it work in practice?

That’s the subject of a new step-by-step guide to solving business problems with artificial intelligence and ML, based on insights gathered by IDG Research Services.

Its publication comes at a time when technology leaders face growing pressure to embrace these emerging technologies, yet many have questions about how to get started.

It has real-life examples such as a health services company that used ML to reduce support ticket-resolution time from 48 minutes to six.

In another section, a financial services VP explains that cloud-based ML services enable his company to avoid spending money on computing resources that sit idle.

The guide also includes concrete tips for new ML adopters, provided by the CIOs and other IT leaders who participated in IDG’s research. For example, a real-estate CIO recommends the use of third-party tools that rely on AI and ML technologies, while a financial services VP highlights the challenge and potential of incorporating unstructured data into ML initiatives.

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38:32 Minutes

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Whitepaper

Everything You Need to Know About Google Cloud ML Engine 101

Machine learning is all around us today. But data scientists and IT teams tasked with creating models have a hard time bringing together the right mix of ingredients—from data, infrastructure, tools, and APIs—to do their jobs effectively.

Google’s Cloud ML Engine eases many of the challenges data scientists and IT teams face. It’s a managed service that allows businesses to build and deploy their own models using any type or any size of data.

With Google’s Cloud ML Engine, data scientists can create models for training and prediction. And it provides APIs for these two building blocks.

Nikhil Kothari, Senior Staff Software Engineer, Google Cloud, breaks down Google’s Cloud ML Engine. He shows you how to use it as a service, so that data scientists can focus on data and on building models instead of managing infrastructure.

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Google Cloud Tools Help U.S. Forest Department Generate Years of Insights into Earth’s Natural Resources

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3:00 Minutes

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In 2011, the U.S. Department of Agriculture’s Forest Service began using Google Earth Engine for Earth Science data analysis for research and understanding. Read the blog to know Google Cloud and Earth Engine analyze 10-years of changes to landscape!

For 117 years, the U.S. Department of Agriculture’s Forest Service has been a steward of America’s forests, grasslands, and waterways. It directly manages 193 million acres and supports sustainable management on a total of 500 million acres of private, state, and tribal lands. Its impact reaches far beyond even that, offering its research and learning freely to the world.

At Google, we’re big admirers of the Forest Service’s mission. So we were thrilled to learn in 2011 that its scientists were using Google Earth Engine, our planetary-scale platform for Earth Science data and analysis, to aid its research, understanding, and effectiveness. In the years since, Google has worked with the Forest Service to meet its unique requirements for visual information about the planet. Using both historical and current data, the Forest Service built new products, workflows, and tools that help more effectively and sustainably manage our natural resources. The Forest Service also uses Earth Engine and Google Cloud to study the effects of climate change, forest fires, insects and disease, helping them create new insights and strategies.

Image 1*

Besides gaining newfound depths of insight, the Forest Service has also sped up its research dramatically, enabling everyone to do more. Using Google Cloud and Earth Engine, the Forest Service reduced the time it took to analyze 10 years worth of land-cover changes from three months to just one hour, using just 100 lines of code. The agency built new models for coping with change, then mapped these changes over time, in its Landscape Change Monitoring System (LCMS) project.

Emergency responders can now work better on new threats that arise after wildfires, hurricanes, and other natural disasters. Forest health specialists can detect and monitor the impacts of invasive insects, diseases, and drought. More Forest Service personnel can use new tools and products within Earth Engine, thanks to numerous training and outreach sessions within the Forest Service.

Image 2*

Researchers elsewhere also benefited when the Forest Service created new toolkits, and posted them to GitHub for public use. For example, there’s geeViz, a repository of Google Earth Engine Python code modules useful for general data processing, analysis, and visualization.

This is only the start. Recently, the Forest Service started using Google Cloud’s processing and analysis tools for projects like California’s Wildfire and Forest Resilience Action Plan. Forest Service researchers also use Google Cloud to better understand ecological conditions across landscapes in projects like Fuelcast, which provides actionable intelligence for rangeland managers, fire specialists, and growers, and the Scenario Investment Planning Platform for modeling local and national land management scenarios.

Image 3*

The Forest Service is a pioneer in building technology to help us better understand and care for our planet. With more frequent imaging, rich satellite data sets, and sophisticated database and computation systems, we can view and model the Earth as a large-scale dynamic system.

We are honored and excited to respond to the unique set of requirements of the scientists, engineers, rangers, and firefighters of the USFS, and look forward to years of learning about — and better caring for — our most precious resources.

*Image 1: The USDA Forest Service (USFS) Geospatial Technology and Applications Center (GTAC) uses science-based remote sensing methods to characterize vegetation and soil condition after wildland fire events. The results are used to facilitate emergency assessments to support hazard mitigation, to inform post-fire restoration planning, and to support the monitoring of national fire policy effectiveness. GTAC currently conducts these mapping efforts using long-established geospatial workflows. However, GTAC has adapted its post-fire mapping and assessment workflows to work within Google Earth Engine (GEE) to accommodate the needs of other users in the USFS. The spatially and temporally comprehensive coverage of moderate resolution multispectral data sources (e.g., Landsat, Sentinel 2) and analytical power provided by GEE allows users to create geospatial burn severity products quickly and easily. Box 1 shows a pre-fire Sentinel-2 false color composite image. Box 2 shows a post-fire Sentinel-2 false color composite image with the fire scar apparent in reddish brown. Box 3 shows a differenced Normalized Burn Ratio (dNBR) image showing the change between the pre- and post-fire images in Boxes 1 and 2. Box 4 shows a thresholded dNBR image of the burned area with four classes of burn severity (unburned to high severity), which is the final output delivered to forest managers.

*Image 2: Leveraging Google Earth Engine (GEE), the USDA Forest Service (USFS) Geospatial Technology and Applications Center (GTAC) and USFS Region 8, developed the Tree Structure Damage Impact Predictive (TreeS-DIP) modeling approach to predict wind damage to trees resulting from large hurricane events and produce spatial products across the landscape. TreeS-DIP results become available within 48 hours following landfall of a large storm event to allow allocation of ground resources to the field for strategic planning and management. Boxes 1 and 3 above show TreeS-DIP modeled outputs with varying data inputs and parameters. Box 2 shows changes in greenness (Normalized Burn Ratio; NBR) that was measured with GEE during the recovery from Hurricane Ida and is shown as a visual comparison to the rapidly available products from TreeS-DIP.

*Image 3: Severe drought conditions across the American West prompted concern about the health and status of pinyon-juniper woodlands, a vast and unique ecosystem. In a cooperative project between the USDA Forest Service (USFS) Geospatial Technology and Applications Center (GTAC) and Forest Health Protection (FHP), Google Earth Engine (GEE) was used to map pinyon pine and juniper mortality across 10 Western US States. The outputs are now being used to plan for future work including on-the-ground efforts, high-resolution imagery acquisitions, aerial surveys, in-depth mortality modeling, and planning for 2022 field season work.

Box 1 contains remote sensing change detection outputs (in white) generated with GEE, showing pinyon-juniper decline across the Southwestern US. Box 2 shows NAIP imagery from 2017 with, with box 3 showing NAIP imagery from 2021. NAIP imagery from these years shows trees changing from healthy and green in 2017 to brown and dying in 2021. In addition, box 2 and box 3 show change detection outputs from Box 1 for a location outside of Flagstaff, AZ converted to polygons (in white). The polygon in box 2 is displayed as a dashed line to serve as a reference, while the solid line in box 3 shows the measured change in 2021. Converting rasters to polygons allows the data to be easily used on tablet computers, as well as the ability to add information and photographs from field visits.

Case Study

How Ather Energy is leveraging the Cloud to build and scale smart mobility solutions for India

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8:30 Minutes

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Ather Energy, India’s first-ever electric scooter, turns to Google Cloud to support the smooth running of its vehicles, lower costs, improve time to market, and create a great customer experience.

In 2013, long before the world was discussing clean energy and sustainable practices, two IIT Madras graduates — Swapnil Jain and Tarun Mehta — had an idea to develop India’s first-ever electrical scooter.

This was at a time when auto manufacturers were still focusing on fossil-fuel-driven vehicles and ‘eco-friendly’ mobility solutions were more a trendy alternative catering to a niche market.

The duo founded Ather Energy in 2013 and launched their first fully-electric scooter, the Ather S340, in Bengaluru in 2016. Since then, the company has released several new models into the market and is planning to expand to eight more cities by the end of the year.

To support the smooth running of their vehicles, lower costs, improve time to market, and create great customer experience, Ather turned to Google Cloud.

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Case Study

Don’t sweat the big stuff. Make it Google’s problem

Need to interpolate new time series data values over 5 billion rows? Don’t reach for python. Make that Google’s problem and do it in BigQuery.

Need to aggregate petabytes of geospatial data across arbitrary polygons and put it on a map for analysis? Make that Google’s problem and use BQ-GIS.

Great – your map was awesome and now we need it every hour. Roll your own Airflow server? Nope. Make that Google’s problem. You see the pattern.

Geotab, which operates in in the telematics space, applies instrumenting to vehicles to learn how to optimize fleet maintenance, routes and costs, and even find way to optimize city infrastructure.

Geotab has been a long-time customer of Google Cloud products. They leverage the entire GCP suite to empower data scientists to efficiently ingest, process, and analyze petabytes of IoT data.

One of the keys to their pace of innovation and growth has been to focus on their key competencies and partner with others to fill in the gaps.

For Geotab’s data scientists this means focusing on the data and model-building and whenever possible making the processing, storage, and orchestration, well Google’s problem.

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Can Users Just Ask Questions of Data in BigQuery and Get Answers?

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L’Oréal: Managing Big-data Complexity with Google Cloud

L’Oreal is a global company with a presence in 150 countries worldwide. Between managing all of its brands and requirements for different countries, L’Oreal looks to data to make insightful business decisions. How does L’Oreal unify its data across all its systems and databases? How does L’Oreal make the data

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Best Practices from Experts to Maximize BigQuery Performance (Featuring Twitter)

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Partnering with Google Cloud is the Key Behind Recent Healthcare Innovations

It’s simply amazing to witness how some of our systems integrators employ Google Cloud solutions to drive innovation in ways we at Google may never have considered—especially in healthcare.  According to analyst firm MarketsandMarkets, the market for the Cloud in healthcare is projected to grow 43% between 2020 and 2025

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